Information for 11-AGAAGCGCGT (Motif 19)

C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T
Reverse Opposite:
G C T A A T G C C T A G G T A C C A T G A T G C A G C T A C G T A G T C G A C T
p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.696
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif553.5
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets51.0 +/- 25.3bp
Average Position of motif in Background52.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAAGCGCGT
NGAAGC----
 C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAAGCGCGT---
ATAAAGGCGCGCGAT
 A C G T A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGCGCGT----
NCANGCGCGCGCGCCA
 A C G T A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T A C G T A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGAAGCGCGT
--AACCGANA
 C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGAAGCGCGT
AAAGRGGAAGTG---
 A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAAGCGCGT---
ATAAGGGCGCGCGAT
 A C G T A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGAAGCGCGT
TGGAACAGMA-
 A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGAAGCGCGT-
-----TGCGTG
 C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGAAGCGCGT
CCGGAAGTGGC-
 A C G T A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGCGCGT----
NNNNATGCGGGTNNNN
 A C G T A C G T C T G A T C A G G T C A T C G A T A C G G T A C C A T G G A T C T A C G C G A T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A