Information for 5-CCCGCCCACT (Motif 3)

A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
Reverse Opposite:
G C T A C A T G C A G T C T A G A C T G A C T G G A T C C T A G A C T G A C T G
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.827
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif565.9
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets55.5 +/- 25.7bp
Average Position of motif in Background49.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCCACT
GCCMCGCCCMCY
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CCCGCCCACT----
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

SP8/MA0747.1/Jaspar

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCCACT
GCCACGCCCACT
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CCCGCCCACT--
YCCGCCCACGCN
 A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCCACT---
GCCCCGCCCCCTCCC
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCCACT
GCTCCGCCCMCY
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCCACT
GCCACRCCCACY
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCCACT
GCCACGCCCCC-
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCCACT
GCCCCGCCCCC-
 A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCCACT
NAGCCCCGCCCCCN
 A C G T A C G T A C G T A C G T A G T C T G A C A G T C C T A G A G T C G T A C A G T C G T C A G T A C C G A T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T