Information for 7-GTAATAGCTA (Motif 8)

A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
Reverse Opposite:
C G A T C G T A A C T G A G T C A C G T G T C A A C G T A G C T C G T A A G T C
p-value:1e-11
log p-value:-2.707e+01
Information Content per bp:1.878
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.0 +/- 31.7bp
Average Position of motif in Background54.0 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barhl1/MA0877.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTAATAGCTA
GCTAATTGCT-
 A C G T A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAATAGCTA
NTAATKGTTT
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAATAGCTA
NTAATTGN--
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTAATAGCTA
-TAATTGGT-
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAATAGCTA
NTAATTGG--
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAATAGCTA
CTAATCGNT-
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAATAGCTA
NTAATTGN--
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAATAGCTA
GTTAATGGCC-
 A C G T A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTAATAGCTA---
NNNGTAATTACNNATA
 A C G T A C G T A C G T A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTAATAGCTA
NTAATTGN--
 A C T G A C G T C T G A C G T A A C G T C G T A C T A G A G T C C G A T C G T A
C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T