Information for 4-WGGCAGTCTGTTCTGK (Motif 6)

C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
Reverse Opposite:
T G A C G T A C C T G A A C T G G C T A G C T A A T G C C G T A A T C G C G T A T A G C A G C T C T A G G T A C G A T C G C A T
p-value:1e-12
log p-value:-2.880e+01
Information Content per bp:1.748
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 24.2bp
Average Position of motif in Background36.1 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WGGCAGTCTGTTCTGK
GVACAGNMTGTYCTB-
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WGGCAGTCTGTTCTGK
GRACAGWMTGTYCTB-
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:WGGCAGTCTGTTCTGK-
-------CTGTTCCTGG
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WGGCAGTCTGTTCTGK
AGNACAGNCTGTTCTN-
 A C G T C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WGGCAGTCTGTTCTGK
GAACADWATGTTCTT-
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-WGGCAGTCTGTTCTGK
AGNACANNNTGTNCTN-
 A C G T C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-WGGCAGTCTGTTCTGK
AGGGAAGTCATTTCT--
 A C G T C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:WGGCAGTCTGTTCTGK----
---NNCTTTGTTTTGNTNNN
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WGGCAGTCTGTTCTGK-----
-GGYAGCAYDTGCTDCCCNNN
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:WGGCAGTCTGTTCTGK
-----TKCTGTTCCA-
 C G T A C A T G A C T G A G T C C T G A A T C G G C A T A T G C C G A T T A C G C G A T C A G T A G T C A G C T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T