Information for 14-CTRCCCGGCT (Motif 16)

A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C T G A C A C T G A C T G A T C G A G C T G T C A T C A G
p-value:1e-5
log p-value:-1.268e+01
Information Content per bp:1.769
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif161.6
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets35.8 +/- 24.6bp
Average Position of motif in Background50.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTRCCCGGCT---
--ACCCGGATGTA
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CTRCCCGGCT-
------NGCTN
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTRCCCGGCT-
-TGCCCAGNHW
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTRCCCGGCT---
-CCCCCTGCTGTG
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTRCCCGGCT
CTGCCCGCA-
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTRCCCGGCT
NNGCNCTGCGCGGC-
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTRCCCGGCT-
-TACCCGCATN
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T
A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTRCCCGGCT
-TCCCCA---
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTRCCCGGCT-
-TTCCCGCCWG
 A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTRCCCGGCT----
TCGTACCCGCATCATT
 A C G T A C G T A G T C C A G T T C G A A T G C T G A C A G T C A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T