Information for 6-AGGWATGTCACTG (Motif 6)

C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G C T G C A T A G T C A G T C A C G T
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.810
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.9 +/- 23.7bp
Average Position of motif in Background56.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:AGGWATGTCACTG
----NTGTCAN--
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGGWATGTCACTG
---CCTGTCAA--
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGGWATGTCACTG
---RHTGWCAR--
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AGGWATGTCACTG
-----TGTCANYT
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGWATGTCACTG
--VGCTGWCAVB-
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGWATGTCACTG
AAYTAGGTCA---
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGWATGTCACTG
NTGGAATGTN----
 A C G T C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGWATGTCACTG
TATAAGTAGGTCAA--
 A C G T A C G T A C G T C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGGWATGTCACTG
---GCTGTCAA--
 C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGWATGTCACTG
NTGGAATGTG----
 A C G T C G T A C T A G C T A G C G T A C T G A A C G T A C T G A C G T A G T C C G T A G T A C C G A T C T A G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T