Information for 6-GGGGGCAGTA (Motif 4)

A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A
Reverse Opposite:
G C A T T C G A A T G C G C A T C A T G G T A C A G T C T G A C A G T C T G A C
p-value:1e-13
log p-value:-3.090e+01
Information Content per bp:1.665
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif850.2
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets52.5 +/- 26.2bp
Average Position of motif in Background50.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
NGTGGGCAT--
 A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA-----
NNNTGGCAGTTGGTNN
 A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
TNNGGGCAG--
 A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
GGTTGGCAT--
 A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGGGCAGTA--
--TGGCAGTTGN
 A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGGGCAGTA--
--TGGCAGTTGG
 A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A A C G T A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGGGCAGTA-
---GGCVGTTR
 A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A A C G T
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGGGCAGTA-
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA
ANTGCGGGGGCGGN-
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G A C T G T C A G A C T G G T A C C G T A T A C G A G C T C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T