Information for 5-AGGGCCCAGTGATYAG (Motif 11)

C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
Reverse Opposite:
A G T C G A C T C T G A C G T A A C G T A G T C T G C A A T G C C G A T A C T G C T A G A T C G T G A C A T G C A G T C C G A T
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.760
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 26.2bp
Average Position of motif in Background48.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG
------CNGTGATTTN
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG
-----GCAGTGATTT-
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG-
-------NNGGATTAGN
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCCAGTGATYAG
NNNNTGCCAGTGATTG-
 A C G T C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

VENTX/MA0724.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGGGCCCAGTGATYAG
-------ACCGATTAG
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AGGGCCCAGTGATYAG
--------RGGATTAR
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG-
-------GNGGATTAGN
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG-
---------GGATTAGC
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG-------
--------CTGATTGGTCNATTT
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AGGGCCCAGTGATYAG
--------CTAATTAG
 C G T A A C T G A T C G A C T G A T G C A G T C G T A C C G T A T A C G A C G T C T A G T C G A A C G T A G C T C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G