Information for 6-GCGGCGCTTTAGA (Motif 5)

A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C G A C T C T G A C G T A C G T A A T C G A T G C A C T G A G T C G T A C A C T G A G T C
p-value:1e-13
log p-value:-3.210e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.1 +/- 25.3bp
Average Position of motif in Background56.8 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCGCTTTAGA
TGCTGTGATTT---
 A C G T A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGGCGCTTTAGA
GCAGTGATTT---
 A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGGCGCTTTAGA
-CGGAGC------
 A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGGCGCTTTAGA----
-TTGACCTTTTGACCTT
 A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCGGCGCTTTAGA-----
--TGACCTTTTGACCTTT
 A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCGGCGCTTTAGA
RGKGGGCGGAGC------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCGGCGCTTTAGA-----
---TATCATTAGAACGCT
 A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCGGCGCTTTAGA
AGGGGGCGGGGCTG----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GCGGCGCTTTAGA
GGGGGCGGGGCC-----
 A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCGGCGCTTTAGA----
--TGACCTTTTGACCTC
 A C T G G T A C A C T G A C T G G T A C A T C G A T G C G A C T A C G T A G C T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C