Information for 4-CTRACCACAWBWA (Motif 3)

A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
Reverse Opposite:
G C A T C G A T T C A G C G T A A C G T A T C G C G A T A C T G A C T G A G C T G A C T C G T A A T C G
p-value:1e-31
log p-value:-7.221e+01
Information Content per bp:1.652
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.71%
Number of Background Sequences with motif399.8
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets46.5 +/- 19.6bp
Average Position of motif in Background51.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CTRACCACAWBWA
NWAACCACADNN-
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CTRACCACAWBWA
NAAACCACAG---
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:CTRACCACAWBWA
-AAACCACAGC--
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CTRACCACAWBWA
-AAACCACAGAN-
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CTRACCACAWBWA
-AAACCACANN--
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CTRACCACAWBWA
-AAACCGCAAA--
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTRACCACAWBWA
-AAACCGCAA---
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CTRACCACAWBWA
--ATCCAC-----
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTRACCACAWBWA--
---ACCACATCCTGT
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTRACCACAWBWA-
--GGCCACACCCAN
A T G C C G A T C T G A T C G A A G T C A G T C C G T A A T G C C G T A G C A T A G T C G C T A C G T A A C G T
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G