Information for 5-CACAGASAAAGAACCA (Motif 14)

A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G C T A C G T A G T C A G C T A C G T A C G T A T C G A C G T A G T C A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 17.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACAGASAAAGAACCA
AAACAGACAAAGGAAT-
 A C G T A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA
-ANAGATAAGAA----
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA
GAAAGTGAAAGT----
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA
-----ACAAAG-----
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA-
-----ACAAAGGNBCCT
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA
--AAAACAAAGG----
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CACAGASAAAGAACCA
AGAAGAACAAAGGACTA
 A C G T A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA
-NCAGATAAGAANNN-
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACAGASAAAGAACCA-----
-AADGAGVCANYASTACAGNC
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CACAGASAAAGAACCA-
---GGAGAAAGGTGCGA
 A G T C C G T A G T A C C G T A A C T G C G T A A T C G C G T A G T C A C T G A A C T G C G T A C T G A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A