Information for 4-AGCWKYKAAGAGCMAM (Motif 4)

G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A C G T A G T C A C G T C G A T G T C A C T G A G T C A C G T A A C T G G T A C A C G T
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 21.6bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGCWKYKAAGAGCMAM
----BTBRAGTGSN--
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCWKYKAAGAGCMAM
----CTYRAGTGSY--
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.52
Offset:9
Orientation:forward strand
Alignment:AGCWKYKAAGAGCMAM
---------CAGCC--
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGCWKYKAAGAGCMAM
--NTTTTACGAGN---
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGCWKYKAAGAGCMAM
-----TTGAGTGSTT-
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCWKYKAAGAGCMAM
ANATTTTACGAGNNNN
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGCWKYKAAGAGCMAM
-----TTAAGTGC---
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGCWKYKAAGAGCMAM--
------AAAGATCAAAGG
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGCWKYKAAGAGCMAM
-GCTATAAATAGC---
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCWKYKAAGAGCMAM
NAATTTTACGAGNTNN
 G T C A A C T G A G T C C G A T A C G T A G C T C A G T C G T A C G T A A C T G C G T A A C T G A G T C G T A C C G T A G T A C
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T