Information for 3-WRRCCACATCAAA (Motif 2)

G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
Reverse Opposite:
G C A T A G C T C G A T T A C G G T C A C G A T C T A G C G A T A C T G A C T G A G T C G A T C C G A T
p-value:1e-87
log p-value:-2.026e+02
Information Content per bp:1.626
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif12.58%
Number of Background Sequences with motif357.7
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets47.8 +/- 24.7bp
Average Position of motif in Background51.0 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-WRRCCACATCAAA
NWAACCACADNN--
 A C G T G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:WRRCCACATCAAA
AAACCACAGAN--
 G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:WRRCCACATCAAA
AAACCACANN---
 G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:WRRCCACATCAAA
AAACCACAGC---
 G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-WRRCCACATCAAA
NAAACCACAG----
 A C G T G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-WRRCCACATCAAA---
ATAACCACTTGAAAATT
 A C G T G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-WRRCCACATCAAA--
TAAGCCACTTGAATTT
 A C G T G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-WRRCCACATCAAA--
TAAGCCACTTGAAATT
 A C G T G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:WRRCCACATCAAA
--ACCACTTGAA-
 G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-WRRCCACATCAAA--
TAAGCCACTTGAAATT
 A C G T G C T A C T A G T C A G A G T C G T A C C G T A A G T C C G T A C A G T A T G C G C T A T C G A C G T A A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T