Information for 15-CGTTGTCCTC (Motif 17)

A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G C G T A A G T C C G T A C G T A A G T C A C T G
p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 29.9bp
Average Position of motif in Background22.7 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGTTGTCCTC
CCATTGTTTT-
 A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGTTGTCCTC-
---TGACCTYA
 A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTTGTCCTC
YCTTTGTTCC-
 A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGTTGTCCTC
CCWTTGTYYB-
 A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTTGTCCTC
CTTTGT----
 A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGTTGTCCTC
CCATTGTTNY-
 A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGTTGTCCTC--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGTTGTCCTC
CCTTTGTTTT-
 A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGTTGTCCTC
CTCATTGTC---
 A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGTTGTCCTC-
---TGACCYCT
 A G T C A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T