Information for 9-CCCCTGCTGG (Motif 11)

A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G
Reverse Opposite:
T G A C A G T C C T G A A C T G T A G C G T C A A C T G C A T G C T A G A C T G
p-value:1e-10
log p-value:-2.347e+01
Information Content per bp:1.848
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif258.6
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets47.8 +/- 31.4bp
Average Position of motif in Background49.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGCTGG-
CCCCCTGCTGTG
 A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGG--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGCTGG----
TCNCCTGCTGNGNNN
 A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.77
Offset:-9
Orientation:forward strand
Alignment:---------CCCCTGCTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGCTGG----
TNTCCTGCTGTGNNG
 A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGG-
GACCCCCCGCTGTG
 A C G T A C G T A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------CCCCTGCTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CCCCTGCTGG--
--CCTGCTGAGH
 A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGG--
GACCCCCCGCTGCGC
 A C G T A C G T A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGG--
GACCCCCCGCTGTGC
 A C G T A C G T A C G T A G T C G A T C G T A C A G T C C A G T A T C G A G T C G A C T A C T G A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C