Information for 4-AKAATTTATWTTCTTK (Motif 9)

C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
Reverse Opposite:
G T A C G T C A G T C A C T A G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C T G A A C G T C G A T G T A C A C G T
p-value:1e-12
log p-value:-2.774e+01
Information Content per bp:1.784
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 28.6bp
Average Position of motif in Background40.9 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3/MA0135.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AKAATTTATWTTCTTK
GATTAATTAATTT-----
 A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AKAATTTATWTTCTTK
NTAATTAATAT-----
 C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AKAATTTATWTTCTTK
CNNAGTAATTAATTNNC---
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AKAATTTATWTTCTTK
ATGAATAATTAATG------
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AKAATTTATWTTCTTK
NTTATTGATTTTTT--
 C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AKAATTTATWTTCTTK
CNNANTAATTAATTNNC---
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AKAATTTATWTTCTTK
-TAATTGATTA-----
 C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AKAATTTATWTTCTTK
GANTTAATTAATTANNN--
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AKAATTTATWTTCTTK
ATGCATAATTAATGAG----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G A C G T A C G T A C G T A C G T

PH0054.1_Hoxa7_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AKAATTTATWTTCTTK
CGAGTTAATTAATAAGC---
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G C T A C G T C G A T G T C A A C G T C G A T A C G T G A C T A G T C A C G T C A G T A C T G
T A G C T C A G G T C A C T A G C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A C T C G T A C G T A A C T G G T A C A C G T A C G T A C G T