Information for 3-RTGASTCATN (Motif 2)

T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
Reverse Opposite:
A G C T T G C A A C G T C A T G C G T A T A G C G A C T T G A C C G T A A G T C
p-value:1e-63
log p-value:-1.455e+02
Information Content per bp:1.691
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif13.25%
Number of Background Sequences with motif707.9
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets51.6 +/- 25.6bp
Average Position of motif in Background51.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUND/MA0491.1/Jaspar

Match Rank:1
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCATN
GGTGACTCATC
 A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:2
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--RTGASTCATN
NNATGASTCATH
 A C G T A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RTGASTCATN
ATGASTCATY
 T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RTGASTCATN
ATGASTCATH
 T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:5
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--RTGASTCATN
NDATGASTCATH
 A C G T A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCATN
TGTGACTCATT
 A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--RTGASTCATN
NNVTGASTCATN
 A C G T A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCATN
GGTGACTCATG
 A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--RTGASTCATN
NNATGAGTCATN
 A C G T A C G T T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.96
Offset:0
Orientation:forward strand
Alignment:RTGASTCATN
ATGACTCATC
 T C A G A C G T A C T G C T G A A T C G C G A T G T A C G T C A A C G T T C G A
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C