Information for 1-NNMVMASATCAAAGGV (Motif 1)

C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G
Reverse Opposite:
A G T C A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T A T C G G C A T A C G T A C T G A C G T G T A C G A T C
p-value:1e-189
log p-value:-4.359e+02
Information Content per bp:1.581
Number of Target Sequences with motif191.0
Percentage of Target Sequences with motif24.33%
Number of Background Sequences with motif531.2
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets52.4 +/- 21.4bp
Average Position of motif in Background50.7 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7L2/MA0523.1/Jaspar

Match Rank:1
Score:0.98
Offset:3
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV-
---AAAGATCAAAGGAA
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.97
Offset:5
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV-
-----ACATCAAAGGNA
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.96
Offset:5
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV
-----ACATCAAAGG-
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NNMVMASATCAAAGGV---
--NNNAGATCAAAGGANNN
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV---
--TATAGATCAAAGGAAAA
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T A C G T A C G T
A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NNMVMASATCAAAGGV---
--NANAGATCAAAGGGNNN
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T A C G T A C G T
A C G T A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV---
--TATAGATCAAAGGAAAA
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.94
Offset:5
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV
-----ACWTCAAAGG-
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G
A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.93
Offset:3
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV
---AAAGATCAAAGG-
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G
A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.92
Offset:3
Orientation:forward strand
Alignment:NNMVMASATCAAAGGV--
---AAAGATCAAAGGGTT
 C A T G A C T G T G C A T G A C T G C A C G T A T A G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G T A C G T C A G A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T