Information for 8-AGAAAGCCCTTTTGAT (Motif 6)

G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T A G T C C G T A C T G A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T A G C T T G A C A C G T
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 18.5bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGAAAGCCCTTTTGAT-----
----AATCCCTTTGATCTATC
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAAAGCCCTTTTGAT-----
----ATTTCCTTTGATCTATA
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT
----------TTTAAT
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT-----
----NNTTCCTTTGATCTANA
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Rarg/MA0859.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT---
---TTGACCTTTTGACCTT
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT-----
----NNTTCCTTTGATCTNNA
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT--
------TNCCTTTGATGT
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT----
----TGACCTTTTGACCTTT
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

RARA/MA0729.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT---
-CATTGACCTTTTGACCTC
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AGAAAGCCCTTTTGAT--
--------CCTTTGATGT
 G T C A A C T G C T G A C G T A C G T A A C T G G T A C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T