Information for 7-CTTGWCTTTGARGTCA (Motif 5)

A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
Reverse Opposite:
C G A T A C T G C G T A A T G C G A C T C G A T A T G C C G T A G C T A C G T A A C T G C G T A A G T C G C T A C T G A A C T G
p-value:1e-13
log p-value:-3.212e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 17.9bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA
--TNCCTTTGATGT--
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA
--TNCCTTTGATCTTN
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA
----CCTTTGATGT--
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA
----CCTTTGAWGT--
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTGWCTTTGARGTCA
ATTGGACTTTGACCCC-
 A C G T A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA
-TTGACTTTT------
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA
GCTGACCTTGAACTN-
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA-
-TGGACTTTGNNCTNTG
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTTGWCTTTGARGTCA---
-------ATGACGTCAYYN
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTTGWCTTTGARGTCA-
-----NGRTGACGTCAY
 A G T C A G C T C A G T A C T G C G A T T G A C A C G T C A G T C G A T A T C G C G T A C T G A T A C G C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T