Information for 5-GMTWAYAAAGCWT (Motif 5)

C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T A C T G A G T C A C G T A G C T A C G T C T A G A C G T C G T A C G T A A C G T A G T C
p-value:1e-13
log p-value:-3.105e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.3 +/- 16.4bp
Average Position of motif in Background23.9 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:GMTWAYAAAGCWT-
-------AAGCTTG
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GMTWAYAAAGCWT
----ACAAAG---
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GMTWAYAAAGCWT
-VRRACAAWGG--
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GMTWAYAAAGCWT--
AGAAGAACAAAGGACTA
 A C G T A C G T C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GMTWAYAAAGCWT---
----ACAAAGGNBCCT
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GMTWAYAAAGCWT
NGYCATAAAWCH-
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GMTWAYAAAGCWT--
ATAAGAACAAAGGACTA
 A C G T A C G T C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GMTWAYAAAGCWT
AAAAATAACAAACGG-
 A C G T A C G T A C G T C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GMTWAYAAAGCWT
-AAAACAAAGG--
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GMTWAYAAAGCWT
---RACAAWGG--
 C T A G G T C A C G A T C G A T C G T A A G T C C G T A C T G A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T