Information for 11-GGGAACAATGTTT (Motif 10)

A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A T C G A C G T A C G T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 22.8bp
Average Position of motif in Background46.4 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGAACAATGTTT-
TTAAGAACAATAAATT
 A C G T A C G T A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGGAACAATGTTT
--NAACAAT----
 A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGAACAATGTTT-
TTTAGAACAATAAAAT
 A C G T A C G T A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGAACAATGTTT-
TWGHWACAWTGTWDC
 A C G T A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGAACAATGTTT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGGAACAATGTTT
---AACAAT----
 A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGAACAATGTTT-
YDGHTACAWTGTADC
 A C G T A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGAACAATGTTT
-VRAACAATGG--
 A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGGAACAATGTTT
--GAACAATGG--
 A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGAACAATGTTT
--RAACAATGGN-
 A C T G A C T G C T A G C G T A C G T A A T G C C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T