Information for 9-GGGGAGCTGTCCA (Motif 9)

T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
Reverse Opposite:
A C G T C A T G T A C G T G C A A T G C G T C A T A C G A G T C A C G T A T G C A G T C G A T C A G T C
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.648
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif429.9
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets51.4 +/- 27.1bp
Average Position of motif in Background50.9 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCTGTCCA---
-GGGCGATGACCAYTC
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A A C G T A C G T A C G T
A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGGGAGCTGTCCA---------
--GGAGCTGTCCATGGTGCTGA
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCTGTCCA
-CGGAGC------
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGCTGTCCA
TGGGGA--------
 A C G T T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGGAGCTGTCCA---
AAAGACCTGTCAATCC
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGGAGCTGTCCA
NNGCAGCTGTC--
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGGAGCTGTCCA----------
--GGCGCTGTCCATGGTGCTGAA
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGGAGCTGTCCA
--GCAGCTGTNN-
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGCTGTCCA
NNAGCAGCTGCT--
 A C G T T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGGAGCTGTCCA
NNGCAGCTGTT--
 T C A G C T A G C T A G T A C G G T C A C T A G A T G C C A G T A T C G A C G T A T G C G A T C T C G A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T