Information for 5-MTCTTGTGGCTAC (Motif 5)

G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
Reverse Opposite:
C A T G C G A T C T G A A C T G A T G C A T G C C G T A A G T C C G T A C G T A A C T G G C T A A C G T
p-value:1e-13
log p-value:-3.204e+01
Information Content per bp:1.796
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 29.0bp
Average Position of motif in Background61.0 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:MTCTTGTGGCTAC
-GTCTGTGGTTT-
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MTCTTGTGGCTAC
RTCATGTGAC---
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MTCTTGTGGCTAC
-NNHTGTGGTTWN
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:MTCTTGTGGCTAC
--NNTGTGGTTT-
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:MTCTTGTGGCTAC
---CTGTGGTTTN
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------MTCTTGTGGCTAC
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MTCTTGTGGCTAC
--GCTGTGGTTT-
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------MTCTTGTGGCTAC
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:MTCTTGTGGCTAC
-TTTTATGGCTN-
 G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---MTCTTGTGGCTAC
ANCCACCTGTTGCNC-
 A C G T A C G T A C G T G T C A C A G T A G T C A C G T A C G T C T A G A C G T A T C G A T C G G T A C A G C T C G T A G T A C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T