Information for 6-CCCATTCTTTCTCHAT (Motif 12)

A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
Reverse Opposite:
C G T A A G C T C A G T T A C G G C T A A T C G C G T A C G T A C G T A A C T G C G T A C G T A C G A T C T A G A C T G A C T G
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 24.1bp
Average Position of motif in Background85.7 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCCATTCTTTCTCHAT--
--ANTCCTTTGTCTNNNN
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCATTCTTTCTCHAT
NNCATTCATTCATNNN
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCCATTCTTTCTCHAT
------CTTTGT----
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCATTCTTTCTCHAT-
--CTTTCANTATGACTV
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCCATTCTTTCTCHAT--
NAGTTTCABTHTGACTNW
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCATTCTTTCTCHAT
TCACTTTCACTTTCN--
 A C G T A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCCATTCTTTCTCHAT
-----CCWTTGTYYB-
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCATTCTTTCTCHAT
CACATTCCAT------
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCATTCTTTCTCHAT--
-NNNTCCTTTGTTCTNNN
 A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCATTCTTTCTCHAT
GACCACATTCATACAAT--
 A C G T A C G T A C G T A G T C G T A C A G T C C G T A A C G T C G A T A G T C C G A T A C G T A C G T A T G C C G A T A T G C G C T A C T G A C G A T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T