Information for 6-GYTCAGCACCTTKGCC (Motif 17)

A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
Reverse Opposite:
C T A G A T C G G T A C G T A C T C G A C G T A C T A G T A C G G A C T T A C G A G T C C G A T A C T G G T C A C T A G T A G C
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.681
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.3 +/- 21.9bp
Average Position of motif in Background51.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GYTCAGCACCTTKGCC------
--TCAGCACCATGGACAGCTCC
 A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GYTCAGCACCTTKGCC------
-TTCAGCACCATGGACAGCGCC
 A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GYTCAGCACCTTKGCC
NGTCAGCANTTT----
 A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GYTCAGCACCTTKGCC
-GTCAGCANNTN----
 A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GYTCAGCACCTTKGCC
HWWGTCAGCAWWTTT---
 A C G T A C G T A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GYTCAGCACCTTKGCC
CTGAGTCAGCAATTT----
 A C G T A C G T A C G T A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GYTCAGCACCTTKGCC
NCTANGTCAGCAAATTT---
 A C G T A C G T A C G T A C G T A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GYTCAGCACCTTKGCC
GCTGAGTCAGCAATTTTT--
 A C G T A C G T A C G T A C G T A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GYTCAGCACCTTKGCC
TGAGTCAGCA--------
 A C G T A C G T A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GYTCAGCACCTTKGCC
AAGTCAGCANTTTTN--
 A C G T A T C G G A T C A C G T G T A C C G T A T A C G A T G C C T G A A G T C G A T C G C A T A G C T A C T G A C T G T A G C G A T C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T