Information for 8-GAGCAGGGAGGAA (Motif 13)

A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
Reverse Opposite:
C G A T A C G T A G T C A G T C A C G T A G T C A G T C A G T C C G A T A C T G A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.1 +/- 11.1bp
Average Position of motif in Background63.2 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGCAGGGAGGAA--
-----GGGAGGACNG
 A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGGGAGGAA
CACAGCAGGGGG---
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAGCAGGGAGGAA
------AGAGGAA
 A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAGCAGGGAGGAA----
-----NDCAGGAARTNN
 A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGCAGGGAGGAA
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GAGCAGGGAGGAA---
------AGAGGAAGTG
 A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-8
Orientation:forward strand
Alignment:--------GAGCAGGGAGGAA
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAGGGAGGAA
CGGAGC---------
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGCAGGGAGGAA
CAGCC--------
 A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGCAGGGAGGAA
-GGGCGGGAAGG-
 A C T G C G T A A C T G A G T C C G T A C T A G C T A G A C T G C G T A C T A G A C T G G T C A C G T A
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T