Information for 9-GCCAGAGGGAGCT (Motif 7)

T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
Reverse Opposite:
C T G A A T C G A G T C A C G T A T G C G A T C A G T C G A C T A T G C A C G T C T A G A T C G A G T C
p-value:1e-14
log p-value:-3.227e+01
Information Content per bp:1.761
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif94.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.9 +/- 19.5bp
Average Position of motif in Background54.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAGGGAGCT
TGTCAGGGGGCG--
 A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAGGGAGCT
AGCCTCAGGCA---
 A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGGGAGCT
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGGGAGCT
NGCCTGAGGCN---
 A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAGGGAGCT
AGCCTCAGGCA---
 A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGAGGGAGCT----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGAGGGAGCT
WTGSCCTSAGGS----
 A C G T A C G T A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCCAGAGGGAGCT
------CGGAGC-
 T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGGGAGCT
ATGCCAGACN-----
 A C G T A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCAGAGGGAGCT---
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T T A C G A T G C A G T C C G T A A T C G C T G A A C T G C A T G A T C G G T C A T A C G A T G C G A C T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C