Information for 17-GGTGGCCACTAGA (Motif 16)

A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C T G A C G T A C T G C T A G A G T C A G T C C G T A G T A C A G T C
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 18.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGGCCACTAGA---------
--TGGCCACCAGGTGGCACTNT
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGTGGCCACTAGA-
----GTCACATGAY
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTGGCCACTAGA-----
-ATAACCACTTGAAAATT
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTGGCCACTAGA--------
--TGGCCACCAGGGGGCGCTA
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCCACTAGA
NNANTGGTGGTCTTNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGCCACTAGA
NTCGGTGGTCGC----
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGCCACTAGA
TCGGTGGTCGCN---
 A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGTGGCCACTAGA-
---GGTCACATGAC
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGTGGCCACTAGA----
-TAAGCCACTTGAAATT
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGTGGCCACTAGA-
-----CCACTTGAA
 A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A A G T C C G A T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A