Information for 15-TTCTTAGCCACAG (Motif 13)

A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C C G A T A T C G A C G T A T C G A T C G A G T C A G C T G T C A C T G A A C T G C T G A C G T A
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 20.2bp
Average Position of motif in Background19.7 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCTTAGCCACAG
-SCCTAGCAACAG
 A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:TTCTTAGCCACAG-
--------CACAGN
 A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTCTTAGCCACAG
TGTTKCCTAGCAACM-
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTCTTAGCCACAG--
----AAACCACAGAN
 A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTCTTAGCCACAG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCTTAGCCACAG
TTCTNMGGAA---
 A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTCTTAGCCACAG-
----AAACCACAGC
 A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCTTAGCCACAG-
TACCATAGCAACGGT
 A C G T A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCTTAGCCACAG-
CCGCATAGCAACGGA
 A C G T A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Stat6/MA0520.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTAGCCACAG
ANTTCTCAGGAANNN
 A C G T A C G T A C G T A G C T A G T C A G C T A C G T C T G A A C T G T A G C A T G C C G T A A T G C C G T A A C T G
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G