Information for 3-GCTGGGRCAGCCA (Motif 7)

A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
Reverse Opposite:
C A G T A C T G A C T G A G T C A C G T A C T G A G C T A G T C G T A C A G T C C G T A A C T G G T A C
p-value:1e-10
log p-value:-2.342e+01
Information Content per bp:1.823
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif69.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets44.5 +/- 26.6bp
Average Position of motif in Background46.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGRCAGCCA
TGCTGASTCAGC--
 A C G T A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTGGGRCAGCCA----
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

MAFG/MA0659.1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGGRCAGCCA---
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTGGGRCAGCCA
WDNCTGGGCA-----
 A C G T A C G T A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GCTGGGRCAGCCA
-------CAGCC-
 A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGGRCAGCCA
NTGCTGAGTCATCCN
 A C G T A C G T A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTGGGRCAGCCA
GCTGTG-------
 A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTGGGRCAGCCA
-AGGTGHCAGACA
 A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTGGGRCAGCCA-
-AGGTGNCAGACAG
 A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCTGGGRCAGCCA-
------BCAGACWA
 A C T G A G T C C G A T A C T G A C T G A C T G T C G A T G A C G T C A A C T G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A