Information for 5-CATGAAGCAGGTC (Motif 7)

A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C
Reverse Opposite:
A C T G C T G A G T A C A G T C A C G T C T A G A G T C A C G T C G A T A G T C G T C A C G A T A T C G
p-value:1e-11
log p-value:-2.566e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 24.7bp
Average Position of motif in Background43.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CATGAAGCAGGTC-
----AAYTAGGTCA
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CATGAAGCAGGTC-
----ATCAAGGTCA
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATGAAGCAGGTC--
-TATAAGTAGGTCAA
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T A C G T
A C G T C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATGAAGCAGGTC--
NNAGGGACAAGGGCNC
 A C G T A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATGAAGCAGGTC-
-ATGCAACAGGTGG
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CATGAAGCAGGTC-
-----AACAGGTGT
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.62
Offset:8
Orientation:forward strand
Alignment:CATGAAGCAGGTC-
--------AGGTCA
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATGAAGCAGGTC
-AGGAAACAGCTG
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATGAAGCAGGTC---
-GAGCAACAGGTGGTT
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T A C G T A C G T
A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CATGAAGCAGGTC---
------VCAGGTRDRY
 A T G C C G T A A C G T A C T G G C T A C G T A C T A G A G T C C G T A A C T G A C T G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C