Information for 9-CCACCTGCAG (Motif 13)

G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T T C A G A G T C C G T A A C T G C A T G C A G T A T C G C A T G
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.827
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif297.0
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets50.9 +/- 26.0bp
Average Position of motif in Background48.5 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCACCTGCAG
SNGCACCTGCHS
 A C G T A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGCAG
NNCACCTGNN-
 A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CCACCTGCAG
NCACCTGTN-
 G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGCAG
AACACCTGCT-
 A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGCAG
ACCACCTGTT-
 A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCACCTGCAG
CGCACCTGCT-
 A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCACCTGCAG---
GGCCYCCTGCTGDGH
 A C G T A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCACCTGCAG--
CCCCCTGCTGTG
 G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CCACCTGCAG--
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C G T A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCACCTGCAG---
ANCCACCTGTTGCNC
 A C G T A C G T G T A C T A G C G T C A G T A C G T A C C G A T T C A G A G T C C G T A A T C G A C G T A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C