Information for 6-SAAAGTCCAGGDGGAB (Motif 6)

A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
Reverse Opposite:
T C G A G C A T A G T C T G A C G C T A A G T C G T A C C G A T C T A G C T A G T C G A A G T C A G C T A C G T A G C T T A G C
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.699
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif43.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets55.9 +/- 25.1bp
Average Position of motif in Background49.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------SAAAGTCCAGGDGGAB
CANAGNNCAAAGTCCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------SAAAGTCCAGGDGGAB
AGAGTCCAAAGTCCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:SAAAGTCCAGGDGGAB
CAAAGGTCAG------
 A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---SAAAGTCCAGGDGGAB
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----SAAAGTCCAGGDGGAB
GGGGTCAAAGTCCAAT-----
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SAAAGTCCAGGDGGAB
-----AACAGGTGNT-
 A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---SAAAGTCCAGGDGGAB
TCTCAAAGGTCACCTG---
 A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:SAAAGTCCAGGDGGAB
-----NNCAGGTGNN-
 A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---SAAAGTCCAGGDGGAB
TCTCAAAGGTCACGAG---
 A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---SAAAGTCCAGGDGGAB
ANGNAAAGGTCA-------
 A C G T A C G T A C G T A T C G C T G A T C G A C T G A A C T G A C G T G A T C A G T C C G T A A C T G T A C G C G A T A C T G A C T G C G T A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T