Information for 5-GCAAAGGGCAATTYCA (Motif 5)

T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
Reverse Opposite:
C G A T A C T G T C A G T C G A T C G A C A G T C G A T C T A G G T A C G A T C A G T C C G A T C G A T A C G T C A T G A T G C
p-value:1e-14
log p-value:-3.290e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.1 +/- 29.5bp
Average Position of motif in Background63.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCAAAGGGCAATTYCA
-CAAAGGTCAG-----
 T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCAAAGGGCAATTYCA
TAGGGCAAAGGTCA------
 A C G T A C G T A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCAAAGGGCAATTYCA
TGGGGCAAAGGTCA------
 A C G T A C G T A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGGGCAATTYCA
GTAGGGCAAAGGTCA------
 A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCAAAGGGCAATTYCA
ANGNAAAGGTCA------
 A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGGGCAATTYCA
AGAGTCCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGGGCAATTYCA
TCTCAAAGGTCACCTG--
 A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGGGCAATTYCA
TCTCAAAGGTCACGAG--
 A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GCAAAGGGCAATTYCA
CANAGNNCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAAAGGGCAATTYCA
GAGGTCAAAGGTCA------
 A C G T A C G T A C G T A C G T T A C G G T A C G T C A G C T A C G T A T C A G C T A G A C T G G A T C G C T A G C T A A G C T A G C T A G T C G T A C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T