Information for 6-AAGTTACCAGTAG (Motif 4)

G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
Reverse Opposite:
A G T C A G C T G T C A G A T C C G A T A C T G A C T G A C G T C T G A C G T A G A T C C G A T A C G T
p-value:1e-16
log p-value:-3.770e+01
Information Content per bp:1.793
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 15.7bp
Average Position of motif in Background86.5 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAGTTACCAGTAG-
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGTTACCAGTAG-----
--ATTTACAGTAGCAAAA
 G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGTTACCAGTAG-----
--ATGTACAGTAGCAAAG
 G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGTTACCAGTAG
--GTAAACAG---
 G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGTTACCAGTAG
----GAACAATGG
 G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGTTACCAGTAG
AAAGTAAACA----
 A C G T G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGTTACCAGTAG--
AAGTCAGCANTTTTN
 G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGTTACCAGTAG
AAGTAAACAAA--
 G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTACCAGTAG
TATGTAAACANG--
 A C G T G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGTTACCAGTAG
TAAGTAAACAAA--
 A C G T G T C A C G T A C A T G A C G T A G C T C G T A T A G C A G T C C G T A C T A G A C G T C T G A A C T G
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T