Information for 22-GGGTAATGGTGTC (Motif 39)

A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A G T C A G T C C T G A A C G T C G A T G T C A A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.102e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 27.4bp
Average Position of motif in Background44.9 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGTAATGGTGTC------
--TNNNNGGTGTCATNTNT
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGTAATGGTGTC
GGGAATTGTAGT-
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGTAATGGTGTC
--NTAATKGTTT-
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C
A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGTAATGGTGTC
-GKTAATGR----
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAATGGTGTC---
CAGGTCACCGTGACCTT
 A C G T A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGTAATGGTGTC-
NAGGTCACNNTGACC
 A C G T A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

RXRA::VDR/MA0074.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGTAATGGTGTC--
GGGTCAACGAGTTCA
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C A C G T A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGTAATGGTGTC-
GTAGGTCACTGGGTCA
 A C G T A C G T A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGTAATGGTGTC-----
--GCGGAGGTGTCGCCTC
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGTAATGGTGTC
--NTAATTGN---
 A C T G A C T G A C T G A C G T C G T A C G T A A G C T A C T G A C T G C G A T A C T G A C G T A G T C
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T