Information for 18-ATGAWTMAGA (Motif 38)

G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
Reverse Opposite:
A C G T A T G C A G C T C A G T T C G A C G A T C A G T A G T C G T C A C G A T
p-value:1e-5
log p-value:-1.180e+01
Information Content per bp:1.681
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif469.6
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets54.7 +/- 27.2bp
Average Position of motif in Background49.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS/MA0476.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATGAWTMAGA
NATGAGTCANN
 A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

BATF::JUN/MA0462.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATGAWTMAGA
GAAATGACTCA--
 A C G T A C G T A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ATGAWTMAGA
NNTNTCATGAATGT--
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATGAWTMAGA
NATGAGTCACN
 A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAWTMAGA--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGAWTMAGA-
DATGASTCATNN
 A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGAWTMAGA--
NTGATTGACAGN
 G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGAWTMAGA
ATGASTCATH
 G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGAWTMAGA
GATGAGTCAT-
 A C G T G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGAWTMAGA--
BTGABTGACAGS
 G C T A C A G T T A C G G T C A G C T A A G C T G T C A T C G A A T C G G T C A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C