Information for 18-CAGGGTCCACTTGTGG (Motif 33)

G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
Reverse Opposite:
T A G C G A T C C G T A T A G C C G T A T C G A A T C G G A C T C T A G A T C G C T G A A G T C A G T C G A T C C G A T A C T G
p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.636
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif89.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.8 +/- 29.0bp
Average Position of motif in Background48.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGGGTCCACTTGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGGGTCCACTTGTGG
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGGGTCCACTTGTGG---
TAGCGCCCCCTGGTGGCCA
 G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGGGTCCACTTGTGG
----ATCCAC------
 G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGGTCCACTTGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAGGGTCCACTTGTGG
-----ACCACTTGAA-
 G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CAGGGTCCACTTGTGG
------CCACTTGAA-
 G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGGGTCCACTTGTGG
CAACGTCCGCGG----
 G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAGGGTCCACTTGTGG
CTCCAGGGGTCAATTGA---
 A C G T A C G T A C G T A C G T G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CAGGGTCCACTTGTGG
CANAGNNCAAAGTCCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C T A G T C A G A C T G G A C T A T G C G A T C C G T A T A G C A C G T A C G T A T C G G A C T C A T G A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T