Information for 14-CTGCTAATCG (Motif 32)

A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G
Reverse Opposite:
A G T C A T C G C G T A A C G T C G A T C G T A A C T G A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.532e+01
Information Content per bp:1.943
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.6 +/- 30.6bp
Average Position of motif in Background35.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CTGCTAATCG--
---CTAATCGNT
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T A C G T
A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTGCTAATCG-
---NTAATTGN
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGCTAATCG--
--GCTAATTGCT
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

BSX/MA0876.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGCTAATCG-
---NTAATTGG
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T
A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTGCTAATCG-
---CTAATKGV
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGCTAATCG
--GCTAATCC
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGCTAATCG--
--GCTAATCCCC
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGCTAATCG--
--GNTAATTGGN
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T A C G T
A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGCTAATCG-
---TTAATCCG
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGCTAATCG-----
-CCTTAATNGNTTTT
 A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T