Information for 5-TGMGMACTGCCCC (Motif 3)

G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C
Reverse Opposite:
T C A G A C T G T A C G A C T G A G T C C G T A C T A G G C A T A C G T T A G C A C T G G T A C C T G A
p-value:1e-17
log p-value:-4.037e+01
Information Content per bp:1.734
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.8 +/- 23.7bp
Average Position of motif in Background51.0 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TGMGMACTGCCCC--
------CTGCCCGCA
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGMGMACTGCCCC-
TGACCTTTGCCCTA
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGMGMACTGCCCC-----
--GGGTGTGCCCAAAAGG
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGMGMACTGCCCC-
TGACCTTTGCCCCA
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGMGMACTGCCCC--
TGACCTTTGCCCTAN
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGMGMACTGCCCC
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGMGMACTGCCCC-
--GGCCCCGCCCCC
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGMGMACTGCCCC--
-NNGCNCTGCGCGGC
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T A C G T
A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TGMGMACTGCCCC--
------ATGCCCACC
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGMGMACTGCCCC--
TGACCTCTGACCCCN
 G A C T A C T G T G A C A T C G T G C A C G T A A G T C C G A T A C T G A G T C A T G C A G T C A G T C A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T