Information for 15-ATCACGTGGSCKR (Motif 24)

C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
Reverse Opposite:
A G C T T G C A C T A G T A G C A G T C A G T C C G T A G T A C C T A G A C G T A C T G C G T A C G A T
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.770
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif53.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.5 +/- 26.7bp
Average Position of motif in Background40.9 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mycn/MA0104.3/Jaspar

Match Rank:1
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
--CACGTGGC---
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:2
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----ATCACGTGGSCKR
CCNNANCACGTGGTCN-
 A C G T A C G T A C G T A C G T C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
--CACGTGGN---
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ATCACGTGGSCKR
ACCACGTGGTNN-
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ATCACGTGGSCKR
GACCACGTGGT---
 A C G T C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
-CCACGTGGNN--
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
-TCACGTGACC--
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
-CCACGTGGNN--
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
GTCACGTGGM---
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:ATCACGTGGSCKR
NNCACGTGGT---
 C G T A G C A T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A T C G A G T C A C G T C T G A
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T