Information for 14-CTCTSTCATTACCATS (Motif 20)

A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
Reverse Opposite:
A T G C C G T A C G A T C T A G A C T G A C G T C G T A C G T A C A G T A C T G C T G A A T C G C G T A A T C G C G T A C T A G
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 15.1bp
Average Position of motif in Background62.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS
----CTCATTTGCATW
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
A C G T A C G T A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS
----BTVATTWGCATA
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
A C G T A C G T A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTCTSTCATTACCATS
------ATTTTCCATT
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS
-TGAGTCATTTC----
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS
GKMTCADRTTWC----
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS
--NTGTCAN-------
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS
-----YCATTAMC---
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTCTSTCATTACCATS
ACTTTCACTTTC-----
 A C G T A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CTCTSTCATTACCATS------
--------TTGCCATGGCAACC
 A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CTCTSTCATTACCATS
TCACTTTCACTTTCN----
 A C G T A C G T A C G T A G T C A C G T A T G C A C G T A T G C A G C T A G T C G C T A A C G T C G A T T C G A A G T C A G T C C G T A A C G T A T C G
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T A C G T