Information for 10-CCATGGGGTCAGA (Motif 16)

A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A
Reverse Opposite:
A G C T A T G C C G A T T C A G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C T G T A C G
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 24.1bp
Average Position of motif in Background42.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCATGGGGTCAGA---
NTNNNGGGGTCANGNNN
 A C G T A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCATGGGGTCAGA--
CGCGCCGGGTCACGTA
 A C G T A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCATGGGGTCAGA
---AGRGGTCA--
 A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCATGGGGTCAGA---
CTCCAGGGGTCAATTGA
 A C G T A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCATGGGGTCAGA---
GGCGAGGGGTCAAGGGC
 A C G T A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCATGGGGTCAGA
--CTGTGGTTTN-
 A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATGGGGTCAGA--
AGAGCGGGGTCAAGTA
 A C G T A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CCATGGGGTCAGA
-----AGGTCA--
 A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCATGGGGTCAGA
---TRAGGTCA--
 A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCATGGGGTCAGA
CCATGTGCTT---
 A T G C A G T C G T C A A G C T A C T G A C T G A C T G A C T G C G A T A G T C C G T A A T C G C T G A
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T