Information for 1-TGVMCTTTGAMCTTTG (Motif 1)

C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
Reverse Opposite:
T G A C G T C A T C G A C T G A C T A G C A T G A C G T G A T C G C T A T C G A C T G A C T A G C A T G A G C T G A T C G T C A
p-value:1e-121
log p-value:-2.802e+02
Information Content per bp:1.582
Number of Target Sequences with motif173.0
Percentage of Target Sequences with motif23.32%
Number of Background Sequences with motif1004.9
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets51.1 +/- 22.6bp
Average Position of motif in Background47.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGGACTTTGNNCTNTG
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGGACTTTGNNCTCN-
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTTTGACCTC--
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TGVMCTTTGAMCTTTG
GTTGACCTTTGACCTTT-
 A C G T A C G T C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTTTGACCTN--
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTTTGACCCC--
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTTTGACCCC--
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTTTGCCCTA--
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTCTGACCCCN-
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGVMCTTTGAMCTTTG
TGACCTTTGACCCC--
 C A G T C T A G T C G A G T A C G A T C G A C T A G C T C G A T C T A G T G C A G T A C G A T C G A C T A G C T C A G T A C T G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T