Information for 8-TTTKGTGGCWCGT (Motif 9)

A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C C T A G G C T A A C T G A G T C G T A C C G T A A G T C G T C A C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 12.5bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT
TTTTATGGCTN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTKGTGGCWCGT
NGANTTTTATGGCTCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT-
------BGCACGTA
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT----
-----TGGCACGTGCCG
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT----
-----TGGCACGTGCCA
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT--
-------GCACGTAY
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT---
------GGCACGTGTC
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TTTKGTGGCWCGT--
-------GCACGTNC
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTKGTGGCWCGT
NTTTTATGAC----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTTKGTGGCWCGT----
-------GCACGTACCC
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G A T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C