Information for 7-CCGATGCACGRCA (Motif 7)

A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C A T G C A T C G C G A T A C T G A T G C C T G A A C G T G T A C C T A G A C T G
p-value:1e-11
log p-value:-2.739e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 29.6bp
Average Position of motif in Background42.8 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:1
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCGATGCACGRCA------
VCAKCTGGNNNCCAGMTGBN
 A C G T A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCGATGCACGRCA
---TBGCACGCAA
 A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCGATGCACGRCA
NNGCNCTGCGCGGC-
 A C G T A C G T A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCGATGCACGRCA
ACGCCCACGCA-----
 A C G T A C G T A C G T A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCGATGCACGRCA---
NNNANTGCAGTGCNNTT
 A C G T A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CCGATGCACGRCA
MTGATGCAAT---
 A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCGATGCACGRCA
ACATATGG------
 A C G T A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCGATGCACGRCA
CTACGCCCACGCACT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CCGATGCACGRCA
CAGCTGNT-----
 A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CCGATGCACGRCA
ATGATGCAAT---
 A G T C A G T C A C T G G T C A A G C T A T C G A G T C C G T A A T G C A T C G T C A G A G T C C G T A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T