Information for 21-CCTGTGAATCWCA (Motif 31)

A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
Reverse Opposite:
A C G T A C T G C G A T A T C G G T C A C G A T A C G T A G T C C G T A A G T C C G T A A C T G C T A G
p-value:1e-6
log p-value:-1.518e+01
Information Content per bp:1.835
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.4 +/- 23.5bp
Average Position of motif in Background53.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGTGAATCWCA
NCTGTCAATCAN-
 A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGAATCWCA
GSCTGTCACTCA--
 A C G T A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGTGAATCWCA
GCTGTG-------
 A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGTGAATCWCA
SCTGTCAVTCAV-
 A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTGTGAATCWCA
GCTGTCAA-----
 A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTGAATCWCA
AAGCACCTGTCAATAT--
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTGAATCWCA
AAAGACCTGTCAATCC--
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTGAATCWCA
AATTACCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTGAATCWCA
AAAGACCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTGTGAATCWCA
CSTGGGAAAD---
 A G T C G T A C A C G T A C T G A C G T A C T G G T C A C G T A A C G T A T G C C G T A T A G C C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T