Information for 8-ACTTAAGGCTGAACWT (Motif 12)

G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
Reverse Opposite:
C T G A C G T A A C T G A C G T A G C T A G T C C G T A C A T G T A G C G T A C A C G T G A C T G T C A T C G A C A T G A C G T
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.713
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 30.2bp
Average Position of motif in Background19.8 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTTAAGGCTGAACWT
--TTAATGTTTAACC-
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAAGGCTGAACWT
AANTCATGCGTGAA---
 A C G T G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTTAAGGCTGAACWT
AGTTAATGATTAACT-
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACTTAAGGCTGAACWT
-GTTAATNATTAAC--
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACTTAAGGCTGAACWT
--TTAATNATTAAC--
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACTTAAGGCTGAACWT
----TWGTCTGV----
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAAGGCTGAACWT
CTTAACCACTTAAGGAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:ACTTAAGGCTGAACWT
----NNNANTGA----
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAAGGCTGAACWT
NNCTNAATTATGANN--
 A C G T G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:ACTTAAGGCTGAACWT-----
-----NNATTGGACTTTNGNN
 G T C A G A T C A G C T A C G T C G T A C G T A A C T G A T C G G A T C C G A T C T A G C T G A C G T A T G A C G C A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C