Information for 4-TGGACCCTGA (Motif 6)

A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A
Reverse Opposite:
C G A T A G T C C T G A A C T G C T A G A C T G G A C T A G T C G T A C G T C A
p-value:1e-12
log p-value:-2.939e+01
Information Content per bp:1.832
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif193.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets41.9 +/- 22.8bp
Average Position of motif in Background49.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGGACCCTGA---
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGACCCTGA
NATGACCTTGA
 A C G T A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGACCCTGA--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGACCCTGA----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGACCCTGA------
TGGACTTTGNNCTNTG
 A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGACCCTGA
AAGACCCYYN
 A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGACCCTGA-
-TGACCTTGAV
 A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGACCCTGA-
ATGACCTTGAA
 A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGACCCTGA
ATGACCTTGA
 A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGACCCTGA-
-TGACCTTGAN
 A C G T A C T G C T A G C T G A A G T C G A T C G T A C G A C T T C A G G C T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A